Disk seeks are a major performance bottleneck. This problem becomes more apparent when the amount of data starts to grow so large that effective caching becomes impossible. For large databases where you access data more or less randomly, you can be sure that you need at least one disk seek to read and a couple of disk seeks to write things. To minimize this problem, use disks with low seek times.

Increase the number of available disk spindles (and thereby reduce the seek overhead) by either symlinking files to different disks or striping the disks:

For reliability you may want to use RAID 0+1 (striping plus mirroring), but in this case, you need 2*N drives to hold N drives of data. This is probably the best option if you have the money for it. However, you may also have to invest in some volume-management software to handle it efficiently.

A good option is to vary the RAID level according to how critical a type of data is. For example, store semi-important data that can be regenerated on a RAID 0 disk, but store really important data such as host information and logs on a RAID 0+1 or RAID N disk. RAID N can be a problem if you have many writes, due to the time required to update the parity bits.

On Linux, you can get much more performance by using hdparm to configure your disk's interface. (Up to 100% under load is not uncommon.) The following hdparm options should be quite good for MySQL, and probably for many other applications:

hdparm -m 16 -d 1

Note that performance and reliability when using this command depend on your hardware, so we strongly suggest that you test your system thoroughly after using hdparm. Please consult the hdparm manual page for more information. If hdparm is not used wisely, filesystem corruption may result, so back up everything before experimenting!

You can also set the parameters for the filesystem that the database uses:

If you don't need to know when files were last accessed (which is not really useful on a database server), you can mount your filesystems with the -o noatime option. That skips updates to the last access time in inodes on the filesystem, which avoids some disk seeks.

On many operating systems, you can set a filesystem to be updated asynchronously by mounting it with the -o async option. If your computer is reasonably stable, this should give you more performance without sacrificing too much reliability. (This flag is on by default on Linux.)