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dist_vars.h
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#ifndef VIENNA_RNA_PACKAGE_DIST_VARS_H
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#define VIENNA_RNA_PACKAGE_DIST_VARS_H
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extern
int
edit_backtrack
;
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extern
char
*
aligned_line
[4];
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extern
int
cost_matrix
;
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/* Global type defs for Distance-Package */
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typedef
struct
{
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int
type;
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int
weight;
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int
father;
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int
sons;
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int
leftmostleaf;
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}
Postorder_list
;
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typedef
struct
{
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Postorder_list
*postorder_list;
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int
*keyroots;
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}
Tree
;
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typedef
struct
{
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int
type;
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int
sign;
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float
weight;
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}
swString
;
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#endif
edit_backtrack
int edit_backtrack
Produce an alignment of the two structures being compared by tracing the editing path giving the mini...
swString
Some other data structure.
Definition:
dist_vars.h:55
cost_matrix
int cost_matrix
Specify the cost matrix to be used for distance calculations.
aligned_line
char * aligned_line[4]
Contains the two aligned structures after a call to one of the distance functions with edit_backtrack...
Tree
Tree data structure.
Definition:
dist_vars.h:47
Postorder_list
Postorder data structure.
Definition:
dist_vars.h:36
ViennaRNA
dist_vars.h
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